Added toc to each docs page and Makefile update target
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# Configuration file reference
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<!-- toc -->
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* [Top level options](#top-level-options)
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* [Diagram options](#diagram-options)
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* [Example complete config](#example-complete-config)
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<!-- tocstop -->
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## Top level options
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* `compilation_database_dir` - path to the directory containing `compile_commands.json`
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* `output_directory` - path to the directory where PlantUML diagrams will be generated
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